BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C02LP1|AL426485
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1566 1612 0.0
>3x_Contig1566
Length = 10355
Score = 1612 bits (813), Expect = 0.0
Identities = 851/857 (99%), Gaps = 5/857 (0%)
Strand = Plus / Minus
Query: 1 tctttaaaatctccctgngtctaaaggaaaatatatgtatgaaagaattcttatacagaa 60
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 5072 tctttaaaatctccctg-gtctaaaggaaaatatatgtatgaaagaattctt-tac-gaa 5016
Query: 61 tcgtcactagctaaagcgttaacaaaatgtttcaattgcatccataacaatgaaattgac 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5015 tcgtcactagctagagcgttaacaaaatgtttcaattgcatccataacaatgaaattg-c 4957
Query: 121 taatcttgaaattgatggtgataaaattgtttccttgcagattccaatcaaaaatgaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4956 taatcttgaaattgatggtgataaaattgtttccttgcagattccaatcaaaaatgaatt 4897
Query: 181 ttccattcttccaaatttaaaagaagatgctgttcttcgtggatctttcttatcctcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4896 ttccattcttccaaatttaaaagaagatgctgttcttcgtggatctttcttatcctcaat 4837
Query: 241 actaaacgaaagttttattggtagaagcactagcttgacaaacgaagattcagataattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4836 actaaacgaaagttttattggtagaagcactagcttgacaaacgaagattcagataattt 4777
Query: 301 gtatgccaaccacgacaggcttctagattatggattgcttttgctcgatgaacctgaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4776 gtatgccaaccacgacaggcttctagattatggattgcttttgctcgatgaacctgaaaa 4717
Query: 361 tattataaaagggcttgaaaacgcttcctttgataacggcgttactgatttacttttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4716 tattataaaagggcttgaaaacgcttcctttgataacggcgttactgatttacttttgat 4657
Query: 421 caaccttgtaagacagttgaagcccactataaggcttggtcaatataaattattaattaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4656 caaccttgtaagacagttgaagcccactataaggcttggtcaatataaattattaattaa 4597
Query: 481 agagctaatcgattctaatgattcctcatatgatgatcaattctgtgaaactactttaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4596 agagctaatcgattctaatgattcctcatatgatgatcaattctgtgaaactactttaaa 4537
Query: 541 gtcgttatgtctacatttaatatactggcgtcacg-ccgtttgatactgccaatatcatc 599
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4536 gtcgttatgtctacatttaatatactggcgtcacgcccgtttgatactgccaatatcatc 4477
Query: 600 gagaaacacatatatagtttctccattggcgccaatctcaggattttcaactgatgactt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4476 gagaaacacatatatagtttctccattggcgccaatctcaggattttcaactgatgactt 4417
Query: 660 caaacatggcgaatacgacaccttaataagacaacaagaagttcctgtgaataacaacga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4416 caaacatggcgaatacgacaccttaataagacaacaagaagttcctgtgaataacaacga 4357
Query: 720 tgaaccgtcgttgatataccaaaacaagaaggtattcaatgaaaaatttccctccttacc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4356 tgaaccgtcgttgatataccaaaacaagaaggtattcaatgaaaaatttccctccttacc 4297
Query: 780 ttctttgccatcgttccttcaacttatgtcaacccagaaacccagacctttcgggcatat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 ttctttgccatcgttccttcaacttatgtcaacccagaaacccagacctttcgggcatat 4237
Query: 840 cataccatccaatgaac 856
|||||||||||||||||
Sbjct: 4236 cataccatccaatgaac 4220
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7912
Number of Sequences: 1807
Number of extensions: 7912
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)